ENCFF225QQQ

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 991.00 52.49 4.47 100.0 SNORD17-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 22.00 2.41 0.10 100.0 SNORD72-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 10.00 14.29 0.05 100.0 SNORD70B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 450.00 29.32 2.03 92.4 RNY4P18-201 misc RNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 116.00 16.43 0.52 100.0 SNORD90-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 97.00 13.74 0.44 74.62 SNORD90-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1314.00 14.65 5.93 100.0 SNORD69-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 4191.00 46.73 18.92 100.0 SNORD69-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 1010.00 11.26 4.56 100.0 SNORD69-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 331.00 3.69 1.49 100.0 SNORD69-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 21.00 10.24 0.09 95.45 SNORD70-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 11840.00 81.52 53.45 85.65 B4GALNT2-202 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 5.00 0.03 0.02 100.0 B4GALNT2-202 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 6286.00 94.50 28.38 100.0 NDE1-202 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 3704.00 53.43 16.72 100.0 MIR450B-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 3208.00 66.94 14.48 100.0 MIR887-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 3.00 100.00 0.01 100.0 MIR889-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 38.00 36.54 0.17 100.0 SNORD111-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 29.00 4.25 0.13 74.36 SNORD88A-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 885.00 96.93 4.00 100.0 MIR548K-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 513.00 42.82 2.32 100.0 MIR320B2-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 319.00 92.46 1.44 100.0 MIR1271-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 4604.00 38.71 20.78 100.0 SNORD100-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1792.00 15.07 8.09 100.0 SNORD100-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 336.00 2.82 1.52 100.0 SNORD100-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)