ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 342.00 5.01 1.67 100.0 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 1272.00 18.63 6.21 90.6 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 819.45 12.00 4.00 36.02 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 271.00 3.97 1.32 100.0 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 1420.09 20.80 6.93 62.42 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 95.00 1.39 0.46 100.0 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 20233.00 95.92 98.81 97.33 MIR146B-201 miRNA transverse colon (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 2633.00 60.29 12.86 100.0 SNHG20-201 lncRNA transverse colon (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 129.00 20.64 0.63 100.0 ATP5MK-205 protein coding transverse colon (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 14.00 2.24 0.07 100.0 ATP5MK-205 protein coding transverse colon (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 14.00 4.76 0.07 100.0 LINC01556-201 lncRNA transverse colon (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 219.00 37.89 1.07 100.0 ATAD3A-202 protein coding transverse colon (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 23.00 10.90 0.11 62.16 TMC5-202 protein coding transverse colon (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 43.00 63.24 0.21 100.0 ZMYM2-203 protein coding transverse colon (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 60.00 0.59 0.29 100.0 RNVU1-7-201 snRNA transverse colon (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 1619.00 74.78 7.91 100.0 SNORD24-201 snoRNA transverse colon (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 432.00 82.13 2.11 100.0 Y_RNA.389-201 misc RNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 148.00 0.53 0.72 100.0 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 501.00 1.79 2.45 76.02 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 26483.00 94.49 129.33 99.35 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 18.00 0.06 0.09 100.0 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 22055.00 97.11 107.71 100.0 SNORD37-201 snoRNA transverse colon (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 59074.00 92.65 288.49 98.97 SNORD59A-201 snoRNA transverse colon (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 10.00 4.26 0.05 100.0 SNORA7B-201 snoRNA transverse colon (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 160.00 58.39 0.78 100.0 SNORD14D-201 snoRNA transverse colon (Tissue)