ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 554.00 67.15 2.71 100.0 MT-TD-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 169.00 0.24 0.83 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 207.00 0.30 1.01 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 63843.00 91.24 311.78 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 1263.00 1.80 6.17 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 705.00 14.73 3.44 68.78 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 705.00 14.73 3.44 100.0 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 535.00 11.18 2.61 100.0 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 339.00 21.61 1.66 100.0 MT-TL2-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 318.00 0.01 1.55 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 97.00 0.00 0.47 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 139.00 0.00 0.68 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 293.00 0.01 1.43 80.94 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 1175.00 0.04 5.74 55.53 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 941.00 0.03 4.60 49.79 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 2927557.00 90.85 14296.68 93.63 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 296.00 53.24 1.45 100.0 MIR196A1-201 miRNA transverse colon (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 48.00 1.43 0.23 100.0 MT-RNR1-201 Mt rRNA transverse colon (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 791.00 23.56 3.86 100.0 MT-RNR1-201 Mt rRNA transverse colon (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 72.00 80.00 0.35 100.0 MIR454-201 miRNA transverse colon (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 155.00 59.39 0.76 100.0 MIR501-201 miRNA transverse colon (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 364.00 84.26 1.78 100.0 MIR769-201 miRNA transverse colon (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 151.00 54.71 0.74 100.0 KRTAP19-1-201 protein coding transverse colon (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 1.00 50.00 0.00 100.0 MIR509-3-201 miRNA transverse colon (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 10.00 100.00 0.05 100.0 MIR301B-201 miRNA transverse colon (Tissue)