ENCFF211GIU

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR183YQY
Description: Part of ENCODE experiment ENCSR183YQY. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 254.00 92.70 1.24 100.0 MIR577-201 miRNA transverse colon (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 91.00 76.47 0.44 93.81 MIR654-201 miRNA transverse colon (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 57.00 96.61 0.28 100.0 MIR204-201 miRNA transverse colon (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 687.00 92.71 3.35 100.0 MIR152-201 miRNA transverse colon (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 3.00 27.27 0.01 100.0 MIR138-1-201 miRNA transverse colon (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 790.00 88.96 3.86 100.0 MIR30C1-201 miRNA transverse colon (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 61.00 89.71 0.30 100.0 MIR660-201 miRNA transverse colon (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 3173.00 68.27 15.50 81.8 MIR125B1-201 miRNA transverse colon (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 283.00 6.09 1.38 100.0 MIR125B1-201 miRNA transverse colon (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 19.00 54.29 0.09 100.0 MIR493-201 miRNA transverse colon (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 13.00 37.14 0.06 100.0 MIR493-201 miRNA transverse colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 5544.98 58.31 27.08 63.04 MIR182-201 miRNA transverse colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 1062.15 11.17 5.19 18.73 MIR182-201 miRNA transverse colon (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 4898.00 88.24 23.92 90.54 MIR100-201 miRNA transverse colon (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 102.00 92.73 0.50 100.0 MIR301A-201 miRNA transverse colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 1442.00 76.82 7.04 89.12 MIR130A-201 miRNA transverse colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 420.00 22.38 2.05 56.76 MIR130A-201 miRNA transverse colon (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 43686.00 98.08 213.34 98.73 MIRLET7F2-201 miRNA transverse colon (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 109.00 76.76 0.53 100.0 MIR652-201 miRNA transverse colon (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1414.00 81.31 6.91 100.0 MIR140-201 miRNA transverse colon (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 34.00 15.04 0.17 100.0 MIR106B-201 miRNA transverse colon (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 63.00 27.88 0.31 57.8 MIR106B-201 miRNA transverse colon (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 8836.00 65.51 43.15 99.0 SNORD83A-201 snoRNA transverse colon (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 3474.00 25.76 16.97 95.91 SNORD83A-201 snoRNA transverse colon (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 255.00 73.49 1.25 100.0 SNORD41-201 snoRNA transverse colon (Tissue)