ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 23.00 12.92 0.11 100.0 HCN2-201 protein coding testis (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 3.00 16.67 0.01 100.0 SLC49A4-201 protein coding testis (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 3.00 18.75 0.01 100.0 ATP5MC3-201 protein coding testis (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 190.00 83.33 0.95 100.0 CDC25A-201 protein coding testis (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 369.00 85.22 1.84 100.0 RUNX3-201 protein coding testis (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 53.00 46.09 0.26 100.0 BLOC1S4-201 protein coding testis (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 61.00 26.18 0.30 100.0 ATAD5-201 protein coding testis (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 25.00 7.37 0.12 100.0 SLITRK5-201 protein coding testis (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 6.00 19.35 0.03 100.0 HASPIN-201 protein coding testis (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 446.00 97.81 2.22 100.0 ATG101-201 protein coding testis (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 17.00 36.17 0.08 100.0 PRICKLE1-201 protein coding testis (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 32.00 96.97 0.16 100.0 MIR133A2-201 miRNA testis (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 13.00 13.40 0.06 100.0 PBLD-204 protein coding testis (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 124322.00 86.55 619.24 96.99 MIRLET7BHG-201 lncRNA testis (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 10165.00 7.08 50.63 83.66 MIRLET7BHG-201 lncRNA testis (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 37.00 3.41 0.18 82.22 MIR375-201 miRNA testis (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 1040.00 95.76 5.18 99.62 MIR375-201 miRNA testis (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 901.00 58.32 4.49 100.0 MIR30E-201 miRNA testis (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 535.00 34.63 2.66 100.0 MIR30E-201 miRNA testis (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 75.00 34.72 0.37 100.0 MIR29A-201 miRNA testis (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 32.00 91.43 0.16 100.0 MIR345-201 miRNA testis (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 1227.00 97.61 6.11 100.0 MIR16-2-201 miRNA testis (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 2.00 1.75 0.01 100.0 MIR340-201 miRNA testis (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 107.00 93.86 0.53 100.0 MIR340-201 miRNA testis (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 222.00 69.38 1.11 100.0 MIR107-201 miRNA testis (Tissue)