ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 374.00 9.42 1.86 94.92 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 1249.72 31.48 6.22 43.2 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 1622.97 40.88 8.08 56.95 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 220773.00 98.63 1099.65 99.7 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 690.00 48.22 3.44 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1904.00 32.95 9.48 60.31 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 145.00 0.01 0.72 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 97.00 0.02 0.48 48.02 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 2039.00 87.17 10.16 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 18.00 0.71 0.09 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 1049930.00 99.63 5229.63 99.97 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 35.00 0.33 0.17 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 6709.00 62.64 33.42 89.13 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 538.00 75.24 2.68 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 41.00 9.69 0.20 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 618.00 24.64 3.08 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 167636.00 99.16 834.98 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 6834.00 98.47 34.04 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 2403.00 23.59 11.97 87.96 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 137.00 1.34 0.68 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 9.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1760.00 62.90 8.77 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 28.00 0.95 0.14 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 583.00 22.92 2.90 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA testis (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 197.00 7.74 0.98 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA testis (Tissue)