ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 513.00 67.15 3.09 100.0 MIR183-201 miRNA upper lobe of left lung (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 1086.00 76.91 6.55 100.0 MIR145-201 miRNA upper lobe of left lung (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 146.00 10.34 0.88 100.0 MIR145-201 miRNA upper lobe of left lung (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 10792.00 97.39 65.08 98.83 MIR186-201 miRNA upper lobe of left lung (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 357.00 81.14 2.15 100.0 MIR200B-201 miRNA upper lobe of left lung (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 161.00 35.00 0.97 100.0 MIR218-1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 39761.00 91.28 239.77 96.07 MIR181B2-201 miRNA upper lobe of left lung (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 53332.00 89.70 321.60 90.23 MIR10B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 59.32 22.47 0.36 51.58 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 158.32 59.97 0.95 66.24 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 12.00 4.55 0.07 100.0 MIR130B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 551.00 16.47 3.32 100.0 MIR199A1-201 miRNA upper lobe of left lung (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 619.56 57.00 3.74 59.06 MIR93-201 miRNA upper lobe of left lung (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 390.79 35.95 2.36 41.44 MIR93-201 miRNA upper lobe of left lung (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 2045.00 85.21 12.33 90.17 MIR532-201 miRNA upper lobe of left lung (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 100.00 97.09 0.60 100.0 MIR15B-201 miRNA upper lobe of left lung (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 736.00 83.92 4.44 100.0 MIR150-201 miRNA upper lobe of left lung (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 108.00 75.52 0.65 100.0 MIR542-201 miRNA upper lobe of left lung (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 39.00 3.77 0.24 100.0 MIR500A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 843.00 81.45 5.08 100.0 MIR500A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 273778.00 80.95 1650.93 97.24 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 14226.00 4.21 85.79 100.0 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 1831.00 0.54 11.04 100.0 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 37442.00 11.07 225.78 82.82 MIR30A-201 miRNA upper lobe of left lung (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 421.00 0.77 2.54 100.0 MIR27B-201 miRNA upper lobe of left lung (Tissue)