ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 88.00 6.76 0.53 70.4 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 277.00 1.54 1.67 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 3.00 0.02 0.02 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 18935.00 83.41 114.18 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 368.00 29.73 2.22 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 1202.00 35.07 7.25 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 50.00 0.05 0.30 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 460.00 0.48 2.77 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 152.00 0.16 0.92 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 4590.00 4.84 27.68 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 1543.00 1.63 9.30 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 56.00 0.06 0.34 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 2529.00 0.07 15.25 71.34 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 3397.00 0.09 20.48 58.93 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 1369.00 0.04 8.26 96.0 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 76416.00 55.10 460.80 83.45 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 9521.00 96.96 57.41 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 2432.00 39.72 14.67 88.99 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 782.00 95.02 4.72 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 46.00 0.03 0.28 88.46 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 6.00 0.00 0.04 11.54 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 128017.00 73.39 771.96 87.69 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 944.00 3.59 5.69 77.7 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 3815.44 14.50 23.01 22.15 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 15059.81 57.24 90.81 83.77 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA upper lobe of left lung (Tissue)