ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 3784.00 1.87 22.82 100.0 MT-TY-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 1083.00 65.08 6.53 100.0 MT-TD-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 755.00 0.17 4.55 100.0 MT-TK-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 484.00 0.11 2.92 100.0 MT-TK-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 347421.00 80.10 2095.01 100.0 MT-TK-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 63957.00 14.75 385.67 100.0 MT-TK-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 3568.00 12.94 21.52 84.73 MT-TS2-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 2944.00 10.68 17.75 100.0 MT-TS2-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 218.00 0.79 1.31 100.0 MT-TS2-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 822.00 19.16 4.96 100.0 MT-TL2-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 1325.00 0.06 7.99 100.0 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 2092828.00 88.66 12620.10 92.89 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 1614.00 0.07 9.73 85.49 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 195.00 0.01 1.18 100.0 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 4369.00 0.19 26.35 67.68 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 2086.00 0.09 12.58 34.92 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 6548.00 0.28 39.49 100.0 MT-TE-201 Mt tRNA upper lobe of left lung (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 9.00 90.00 0.05 100.0 MIR196A1-201 miRNA upper lobe of left lung (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 797.00 14.18 4.81 100.0 MT-RNR1-201 Mt rRNA upper lobe of left lung (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 42.00 79.25 0.25 100.0 MIR454-201 miRNA upper lobe of left lung (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 436.00 54.36 2.63 100.0 MIR501-201 miRNA upper lobe of left lung (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 1177.00 90.75 7.10 100.0 MIR769-201 miRNA upper lobe of left lung (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 249.00 22.62 1.50 100.0 KRTAP19-1-201 protein coding upper lobe of left lung (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 1.00 6.67 0.01 100.0 MIR708-201 miRNA upper lobe of left lung (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 556.00 91.75 3.35 100.0 MIR509-3-201 miRNA upper lobe of left lung (Tissue)