ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 30.00 0.04 0.11 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 155.00 0.19 0.59 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 242.00 0.29 0.92 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 73623.00 87.92 279.94 96.63 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 300.00 0.36 1.14 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 21.00 0.15 0.08 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 39781.00 75.74 151.26 91.34 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 6.00 0.04 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 60.00 1.51 0.23 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 121.00 3.04 0.46 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 471.00 11.85 1.79 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 1697.00 42.70 6.45 86.8 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 1005.00 0.05 3.82 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 4239.00 52.37 16.12 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 14.00 3.68 0.05 73.68 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 5.00 1.32 0.02 26.32 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 236.00 7.31 0.90 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 3.00 0.09 0.01 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 977.00 81.48 3.71 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 44.00 18.33 0.17 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 372.00 51.67 1.41 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 5.00 0.03 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 533.00 3.37 2.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 37.00 0.23 0.14 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 289.00 1.83 1.10 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)