ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 880.00 13.41 3.35 100.0 MIR125B1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 3688.00 56.19 14.02 75.73 MIR125B1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 64.86 20.08 0.25 23.25 MIR182-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 214.29 66.34 0.81 69.13 MIR182-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 10105.00 86.05 38.42 88.49 MIR100-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 44.00 97.78 0.17 100.0 MIR301A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 867.00 81.72 3.30 90.03 MIR130A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 183.00 17.25 0.70 51.4 MIR130A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 145655.00 98.41 553.82 98.87 MIRLET7F2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 102.00 84.30 0.39 100.0 MIR652-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 4.00 100.00 0.02 100.0 MIR653-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 949.00 83.17 3.61 100.0 MIR140-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 20.00 31.75 0.08 64.52 MIR106B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 4486.00 40.23 17.06 97.27 SNORD83A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 2722.00 24.41 10.35 95.14 SNORD83A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 1469.00 85.46 5.59 100.0 SNORD41-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 64.00 2.38 0.24 100.0 MT-TF-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 54.00 2.00 0.21 59.34 MT-TF-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 869.00 32.26 3.30 69.52 MT-TF-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 768.00 27.66 2.92 100.0 MT-TV-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 6.00 0.02 0.02 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 8.00 0.03 0.03 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 3120.00 11.66 11.86 78.59 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 1100.00 4.11 4.18 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 277.00 1.04 1.05 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)