ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 36.00 1.09 0.31 100.0 7SK.1-201 misc RNA right lobe of liver (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 889.00 26.90 7.61 87.59 7SK.1-201 misc RNA right lobe of liver (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 278.00 8.41 2.38 64.35 7SK.1-201 misc RNA right lobe of liver (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 1138.00 55.84 9.75 100.0 RNA5SP77-201 rRNA pseudogene right lobe of liver (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 7395.00 65.54 63.33 100.0 SNORD114-22-201 snoRNA right lobe of liver (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 3704.00 32.83 31.72 98.96 SNORD114-22-201 snoRNA right lobe of liver (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 10808.00 79.96 92.56 100.0 SNORD6-201 snoRNA right lobe of liver (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 488.00 3.61 4.18 100.0 SNORD6-201 snoRNA right lobe of liver (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 7069.02 24.65 60.54 60.78 SNORD82-201 snoRNA right lobe of liver (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1252.00 4.37 10.72 100.0 SNORD82-201 snoRNA right lobe of liver (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 3179.00 11.09 27.23 100.0 SNORD82-201 snoRNA right lobe of liver (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 4440.00 15.49 38.03 86.1 SNORD82-201 snoRNA right lobe of liver (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 85.00 0.30 0.73 100.0 SNORD82-201 snoRNA right lobe of liver (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 5209.00 18.17 44.61 99.9 SNORD82-201 snoRNA right lobe of liver (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 5075.05 17.70 43.46 43.63 SNORD82-201 snoRNA right lobe of liver (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 192090.00 96.60 1645.14 97.93 MIR146B-201 miRNA right lobe of liver (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 1509.00 89.24 12.92 100.0 SNHG20-201 lncRNA right lobe of liver (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 44.00 11.76 0.38 100.0 ATP5MK-205 protein coding right lobe of liver (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 18.00 4.81 0.15 100.0 ATP5MK-205 protein coding right lobe of liver (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 7.00 1.32 0.06 100.0 LINC01556-201 lncRNA right lobe of liver (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 645.00 51.81 5.52 100.0 ATAD3A-202 protein coding right lobe of liver (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 39.00 38.24 0.33 65.0 TMC5-202 protein coding right lobe of liver (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 547.00 94.47 4.68 100.0 ZMYM2-203 protein coding right lobe of liver (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 252.00 6.89 2.16 100.0 RNVU1-7-201 snRNA right lobe of liver (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 117.00 62.90 1.00 100.0 Y_RNA.389-201 misc RNA right lobe of liver (Tissue)