ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 102.00 57.63 0.87 73.38 ENST00000827714 lncRNA right lobe of liver (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 37.00 20.90 0.32 26.62 ENST00000827714 lncRNA right lobe of liver (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 597.00 1.18 5.11 100.0 GAS5-377 lncRNA right lobe of liver (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 28.00 0.06 0.24 100.0 GAS5-377 lncRNA right lobe of liver (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1473.00 2.90 12.62 100.0 GAS5-377 lncRNA right lobe of liver (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 47498.00 93.66 406.79 100.0 GAS5-377 lncRNA right lobe of liver (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 7.00 50.00 0.06 100.0 MIR205HG-245 lncRNA right lobe of liver (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 91.00 2.03 0.78 100.0 ZFAS1-238 lncRNA right lobe of liver (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 44.00 0.98 0.38 100.0 ZFAS1-238 lncRNA right lobe of liver (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 2753.00 61.40 23.58 100.0 ZFAS1-238 lncRNA right lobe of liver (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 6406.00 92.09 54.86 100.0 ZFAS1-242 lncRNA right lobe of liver (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 14296.00 60.48 122.44 100.0 ENST00000837997 lncRNA right lobe of liver (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 3129.00 13.24 26.80 100.0 ENST00000837997 lncRNA right lobe of liver (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 1539.00 49.19 13.18 57.75 ENST00000839036 lncRNA right lobe of liver (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 122.00 17.18 1.04 100.0 ENST00000849527 lncRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 31309.00 82.16 268.14 95.97 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 15.00 0.04 0.13 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 65.00 0.03 0.56 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 4865.00 71.17 41.67 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 301.00 4.40 2.58 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 46.00 5.06 0.39 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 313.00 1.46 2.68 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 2185.00 48.76 18.71 93.78 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 1291.00 0.62 11.06 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 2.00 8.00 0.02 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA right lobe of liver (Tissue)