ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 1831.00 7.46 15.68 91.5 MIR99AHG-370 lncRNA right lobe of liver (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 21251.00 86.64 182.00 97.03 MIR99AHG-370 lncRNA right lobe of liver (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 807.00 95.62 6.91 100.0 HPS4-237 retained intron right lobe of liver (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 186.00 92.08 1.59 100.0 MEG8-253 lncRNA right lobe of liver (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 37.00 32.46 0.32 100.0 MEG9-206 lncRNA right lobe of liver (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 415.00 10.78 3.55 100.0 DNAJC5-203 nonsense mediated decay right lobe of liver (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 2215.00 11.34 18.97 100.0 ENST00000707189 TEC right lobe of liver (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 21891.94 31.27 187.49 35.62 MIR17HG-214 lncRNA right lobe of liver (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 176.00 0.25 1.51 100.0 MIR17HG-214 lncRNA right lobe of liver (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 43968.40 62.81 376.56 67.71 MIR17HG-214 lncRNA right lobe of liver (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 985.00 1.41 8.44 100.0 MIR17HG-214 lncRNA right lobe of liver (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 685.00 0.98 5.87 100.0 MIR17HG-214 lncRNA right lobe of liver (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 59.00 0.08 0.51 100.0 MIR17HG-214 lncRNA right lobe of liver (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 106.00 0.15 0.91 100.0 MIR17HG-214 lncRNA right lobe of liver (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 10957.00 6.71 93.84 100.0 SNHG32-223 lncRNA right lobe of liver (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 327.00 0.20 2.80 100.0 SNHG32-223 lncRNA right lobe of liver (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 16.00 0.01 0.14 100.0 SNHG32-223 lncRNA right lobe of liver (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 2631.00 1.61 22.53 61.72 SNHG32-223 lncRNA right lobe of liver (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 146144.00 89.55 1251.64 100.0 SNHG32-223 lncRNA right lobe of liver (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 20254.00 85.66 173.46 99.62 SNHG32-227 lncRNA right lobe of liver (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 2207.00 9.33 18.90 100.0 SNHG32-227 lncRNA right lobe of liver (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 54.00 0.23 0.46 100.0 SNHG32-227 lncRNA right lobe of liver (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 4769.00 83.29 40.84 100.0 B4GALT1-203 nonsense mediated decay right lobe of liver (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 644.00 1.02 5.52 100.0 ENST00000722183 lncRNA right lobe of liver (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 9001.00 14.20 77.09 79.15 ENST00000722183 lncRNA right lobe of liver (Tissue)