ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 63.00 3.71 0.54 100.0 HCN2-201 protein coding right lobe of liver (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 11.00 0.63 0.09 100.0 ATP5MC3-201 protein coding right lobe of liver (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 810.00 92.78 6.94 100.0 CDC25A-201 protein coding right lobe of liver (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 326.00 29.58 2.79 100.0 RUNX3-201 protein coding right lobe of liver (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 2469.00 74.91 21.15 100.0 BLOC1S4-201 protein coding right lobe of liver (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 223.00 19.98 1.91 100.0 ATAD5-201 protein coding right lobe of liver (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 246.00 8.39 2.11 100.0 SLITRK5-201 protein coding right lobe of liver (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 11.00 32.35 0.09 100.0 HASPIN-201 protein coding right lobe of liver (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 422.00 99.76 3.61 100.0 ATG101-201 protein coding right lobe of liver (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 148.00 55.43 1.27 100.0 PRICKLE1-201 protein coding right lobe of liver (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 19.00 100.00 0.16 100.0 MIR133A2-201 miRNA right lobe of liver (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 93.00 17.71 0.80 100.0 PBLD-204 protein coding right lobe of liver (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 172131.00 91.60 1474.20 98.46 MIRLET7BHG-201 lncRNA right lobe of liver (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 6226.00 3.31 53.32 82.01 MIRLET7BHG-201 lncRNA right lobe of liver (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 151.00 3.52 1.29 70.56 MIR375-201 miRNA right lobe of liver (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 4047.00 94.29 34.66 98.76 MIR375-201 miRNA right lobe of liver (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 4942.00 44.05 42.33 100.0 MIR30E-201 miRNA right lobe of liver (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 5456.00 48.64 46.73 100.0 MIR30E-201 miRNA right lobe of liver (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 405.00 52.73 3.47 100.0 MIR29A-201 miRNA right lobe of liver (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 154.00 90.06 1.32 100.0 MIR345-201 miRNA right lobe of liver (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 5012.00 98.84 42.92 100.0 MIR16-2-201 miRNA right lobe of liver (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 2948.00 95.90 25.25 100.0 MIR340-201 miRNA right lobe of liver (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 19.00 0.62 0.16 100.0 MIR340-201 miRNA right lobe of liver (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 1189.00 72.46 10.18 100.0 MIR107-201 miRNA right lobe of liver (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 164.00 93.18 1.40 93.18 MIR381-201 miRNA right lobe of liver (Tissue)