ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 233.00 1.39 1.04 100.0 RNY1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 349.00 58.75 1.56 100.0 SNORD115-42-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 3995.56 5.41 17.88 37.27 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1977.00 2.67 8.85 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 434.00 0.59 1.94 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 260.00 0.35 1.16 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 1221.00 1.65 5.46 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 603.00 0.82 2.70 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 493.47 0.67 2.21 69.6 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 413.00 0.56 1.85 100.0 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 489.80 0.66 2.19 60.84 RNA5SP202-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 1091.00 41.44 4.88 100.0 SNORD114-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 1061.00 40.30 4.75 100.0 SNORD114-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1904.00 19.80 8.52 100.0 Y_RNA.234-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 66.00 0.10 0.30 100.0 RNA5S9-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 99.00 88.39 0.44 100.0 SNORD115-23-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 88.00 2.85 0.39 100.0 RNA5SP141-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 127.00 65.13 0.57 100.0 SNORD114-15-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 14.00 18.42 0.06 100.0 ENST00000364722 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 399.00 56.44 1.79 100.0 SNORD115-15-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 39.00 40.21 0.17 100.0 SNORD113-3-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 2155.00 76.72 9.64 100.0 SNORD52-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 1474.00 40.83 6.60 83.89 SNORD117-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 283.00 7.84 1.27 23.62 SNORD117-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 2103.00 77.29 9.41 98.0 SNORD114-3-201 snoRNA esophagus muscularis mucosa (Tissue)