ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 165.00 0.25 0.74 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 40830.00 77.76 182.72 87.24 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 1.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 30.00 1.28 0.13 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 520.00 22.27 2.33 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 770.00 32.98 3.45 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 167.00 7.15 0.75 64.98 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 196.00 0.01 0.88 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 3516.00 64.21 15.73 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 2.00 0.75 0.01 66.67 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 1.00 0.38 0.00 33.33 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 216.00 5.77 0.97 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 7526.00 95.35 33.68 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 65.00 18.90 0.29 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 296.00 58.38 1.32 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 25.00 0.12 0.11 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 941.00 4.42 4.21 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 39.00 0.18 0.17 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 2039.00 9.58 9.12 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 104.00 0.49 0.47 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 3.00 0.01 0.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 453.00 0.02 2.03 93.4 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 1348.00 0.05 6.03 60.23 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 1222.00 0.05 5.47 70.39 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA esophagus muscularis mucosa (Tissue)