ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 65.00 36.11 0.29 100.0 SNORD115-34-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 1.00 2.08 0.00 100.0 RNU5E-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 24.00 0.53 0.11 24.24 RNA5SP370-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 67.00 15.09 0.30 100.0 SNORA31-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 10.00 0.22 0.04 100.0 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 96.00 2.12 0.43 60.38 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 52.00 1.15 0.23 36.88 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 322.00 7.10 1.44 100.0 RNA5SP389-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 50.00 0.32 0.22 100.0 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 1366.00 8.77 6.11 66.8 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 793.00 5.09 3.55 62.99 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 2029.00 13.03 9.08 83.46 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 878.00 5.64 3.93 77.29 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 144.00 0.92 0.64 100.0 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 2815.00 18.07 12.60 89.22 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 951.00 6.11 4.26 68.61 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 421.60 2.71 1.89 64.17 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1129.00 7.25 5.05 71.41 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 218.82 1.40 0.98 48.73 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 245.53 1.58 1.10 64.61 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 317.11 2.04 1.42 36.45 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 479.00 3.08 2.14 17.53 RNU5A-1-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 1387.00 88.40 6.21 100.0 SNORD114-14-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 642.00 2.83 2.87 100.0 SNORD104-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 2334.00 10.28 10.44 100.0 SNORD104-201 snoRNA esophagus muscularis mucosa (Tissue)