ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 2567.00 80.90 11.49 86.9 ENST00000839036 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 70.00 9.06 0.31 100.0 ENST00000849527 lncRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 269623.00 97.49 1206.57 99.45 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 2.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 29.00 0.00 0.13 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 416.00 11.48 1.86 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 2944.00 81.24 13.17 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 12.00 3.53 0.05 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 41.00 1.99 0.18 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 5431.00 57.62 24.30 76.44 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 56.00 0.00 0.25 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 37.00 56.06 0.17 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 2788.00 24.79 12.48 90.2 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 62.00 0.55 0.28 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 271.00 20.48 1.21 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 76.00 0.00 0.34 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 94.00 0.01 0.42 65.28 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 38.00 0.00 0.17 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 31.00 0.00 0.14 86.11 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 444411.00 25.35 1988.76 49.61 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 517.00 0.03 2.31 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 11.00 0.00 0.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 1558.00 84.86 6.97 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 8.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 1002.00 27.71 4.48 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA esophagus muscularis mucosa (Tissue)