ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 8.00 1.84 0.04 100.0 ENST00000772672 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 146.00 15.82 0.65 100.0 ENST00000773843 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 19.00 0.01 0.09 100.0 SNHG12-223 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 119475.00 32.85 534.66 85.81 SNHG12-223 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 243163.00 66.86 1088.16 99.16 SNHG12-223 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 14125.00 1.25 63.21 100.0 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1036866.00 91.77 4640.02 96.42 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 259.00 0.02 1.16 100.0 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 2315.96 0.20 10.36 35.74 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 5264.18 0.47 23.56 44.66 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 4338.15 0.38 19.41 28.99 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 4398.00 0.39 19.68 87.26 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 420.00 0.04 1.88 100.0 SNHG25-206 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 228.00 83.21 1.02 84.76 MIR155HG-205 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 52.00 75.36 0.23 100.0 ENST00000784740 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 190.00 5.99 0.85 78.19 ENST00000786284 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 555.00 17.49 2.48 100.0 ENST00000786284 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 53.00 1.67 0.24 64.63 ENST00000786284 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 1235.16 24.62 5.53 44.02 ENST00000797550 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 1289.21 25.70 5.77 45.94 ENST00000797550 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 1007.00 20.07 4.51 79.92 ENST00000797550 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 58696.00 86.67 262.67 93.08 MIR181A1HG-212 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 124.00 0.18 0.55 100.0 MIR181A1HG-212 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 12.00 44.44 0.05 100.0 C19orf48P-218 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 426.00 45.66 1.91 94.67 SNHG18-220 lncRNA esophagus muscularis mucosa (Tissue)