ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 6.00 54.55 0.03 100.0 MIR183-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 1669.00 6.10 7.47 100.0 MIR145-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 22365.00 81.68 100.08 100.0 MIR145-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 4074.00 96.84 18.23 98.52 MIR186-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 7.00 63.64 0.03 100.0 MIR200B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 156.00 48.60 0.70 100.0 MIR218-1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 3388.00 90.11 15.16 94.24 MIR181B2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 1.00 25.00 0.00 100.0 MIR495-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 519837.00 88.85 2326.29 89.49 MIR10B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 43.39 52.27 0.19 58.63 MIR130B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 9.00 10.84 0.04 100.0 MIR130B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 20.94 25.22 0.09 63.44 MIR130B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 332.00 8.10 1.49 100.0 MIR199A1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 2.00 100.00 0.01 100.0 MIR487B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 191.95 23.55 0.86 26.85 MIR93-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 564.59 69.28 2.53 72.11 MIR93-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 514.00 85.38 2.30 91.79 MIR532-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 36.00 87.80 0.16 100.0 MIR15B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 146.00 83.43 0.65 100.0 MIR150-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 65.00 72.22 0.29 100.0 MIR542-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 14.00 6.31 0.06 100.0 MIR500A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 149.00 67.12 0.67 100.0 MIR500A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 6200.00 4.83 27.75 100.0 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 389.00 0.30 1.74 100.0 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 12726.00 9.92 56.95 81.19 MIR30A-201 miRNA esophagus muscularis mucosa (Tissue)