ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 3458.00 67.79 6.31 100.0 HCN2-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 4.00 9.30 0.01 100.0 SLC49A4-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 7.00 2.33 0.01 100.0 ATP5MC3-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 402.00 78.21 0.73 100.0 CDC25A-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 4157.00 80.14 7.59 100.0 RUNX3-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 347.00 10.66 0.63 100.0 BLOC1S4-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 721.00 57.59 1.32 100.0 ATAD5-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 37.00 9.46 0.07 100.0 SLITRK5-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 1381.00 59.55 2.52 100.0 HASPIN-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 296.00 98.67 0.54 100.0 ATG101-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 126.00 68.48 0.23 100.0 PRICKLE1-201 protein coding esophagus squamous epithelium (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 1390.00 96.66 2.54 98.86 MIR133A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 41.00 42.27 0.07 100.0 PBLD-204 protein coding esophagus squamous epithelium (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 115066.00 82.38 210.04 97.89 MIRLET7BHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 16434.00 11.77 30.00 84.87 MIRLET7BHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 436.00 1.78 0.80 66.46 MIR375-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 23810.00 97.24 43.46 99.61 MIR375-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 1769.00 21.31 3.23 100.0 MIR30E-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 5854.00 70.51 10.69 100.0 MIR30E-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 646.00 45.33 1.18 100.0 MIR29A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 218.00 84.17 0.40 100.0 MIR345-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 13208.00 98.99 24.11 100.0 MIR16-2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 16.00 1.54 0.03 100.0 MIR340-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 983.00 94.61 1.79 100.0 MIR340-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 517.00 60.33 0.94 100.0 MIR107-201 miRNA esophagus squamous epithelium (Tissue)