ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 16710.00 89.68 30.50 100.0 SNORD6-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 280.00 8.62 0.51 100.0 RNY3-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 11788.00 26.40 21.52 98.69 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 87.00 0.19 0.16 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 2360.00 5.28 4.31 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 11518.95 25.80 21.03 66.39 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1011.00 2.26 1.85 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 8179.00 18.32 14.93 90.28 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 5553.50 12.44 10.14 32.01 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 14157.00 93.51 25.84 95.26 MIR146B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 8.00 13.11 0.01 100.0 SNHG20-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 70.00 17.03 0.13 100.0 ATP5MK-205 protein coding esophagus squamous epithelium (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 68.00 16.55 0.12 100.0 ATP5MK-205 protein coding esophagus squamous epithelium (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 19.00 17.59 0.03 100.0 LINC01556-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 123.00 14.44 0.22 100.0 ATAD3A-202 protein coding esophagus squamous epithelium (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 7.00 8.05 0.01 50.0 TMC5-202 protein coding esophagus squamous epithelium (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 111.00 89.52 0.20 100.0 ZMYM2-203 protein coding esophagus squamous epithelium (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 46.00 1.60 0.08 100.0 RNVU1-7-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 4780.00 73.36 8.73 100.0 SNORD24-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 541.00 77.95 0.99 100.0 Y_RNA.389-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 6652.00 2.54 12.14 85.59 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 251672.00 96.01 459.39 99.79 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 165.00 0.06 0.30 100.0 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 384.00 0.15 0.70 100.0 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 69861.00 97.82 127.52 100.0 SNORD37-201 snoRNA esophagus squamous epithelium (Tissue)