ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 197.41 5.01 0.36 18.18 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 32.00 0.81 0.06 100.0 RNY1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 128.00 41.56 0.23 100.0 SNORD115-42-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 2403.54 7.27 4.39 43.59 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 461.00 1.39 0.84 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1004.00 3.04 1.83 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 430.00 1.30 0.78 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 118.00 0.36 0.22 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 444.00 1.34 0.81 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 279.93 0.85 0.51 61.79 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 272.00 0.82 0.50 100.0 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 256.07 0.77 0.47 57.41 RNA5SP202-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 816.00 20.16 1.49 100.0 SNORD114-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 2895.00 71.53 5.28 100.0 SNORD114-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1681.00 9.31 3.07 100.0 Y_RNA.234-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 479.00 1.53 0.87 100.0 RNA5S9-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 157.00 74.41 0.29 100.0 SNORD115-23-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 30.00 0.84 0.05 100.0 RNA5SP141-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 412.00 82.40 0.75 100.0 SNORD114-15-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 147.00 37.12 0.27 100.0 ENST00000364722 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 182.00 46.19 0.33 100.0 SNORD115-15-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 478.00 65.66 0.87 100.0 SNORD113-3-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 7676.00 76.22 14.01 100.0 SNORD52-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 5707.00 62.17 10.42 86.04 SNORD117-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 926.00 10.09 1.69 24.8 SNORD117-201 snoRNA esophagus squamous epithelium (Tissue)