ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 4576.00 0.11 8.35 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 556332.00 13.18 1015.50 99.92 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 1037.00 0.02 1.89 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 336.00 0.01 0.61 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 853.00 0.02 1.56 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 1447.00 0.03 2.64 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 1188.00 0.03 2.17 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 518.00 0.01 0.95 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 15720.00 0.37 28.69 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 293.00 0.01 0.53 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 647.00 0.02 1.18 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 96255.00 2.28 175.70 83.33 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 11.00 0.00 0.02 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 837179.00 19.83 1528.15 98.43 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 35.00 0.00 0.06 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 58.00 0.00 0.11 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 2.00 0.00 0.00 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 70633.00 1.67 128.93 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 1266.00 0.03 2.31 74.78 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1456.19 0.03 2.66 37.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 638.00 0.02 1.16 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 1191.00 0.03 2.17 60.33 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 520.00 0.01 0.95 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 594.00 0.01 1.08 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1252.00 0.03 2.29 100.0 SNHG1-248 lncRNA esophagus squamous epithelium (Tissue)