ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 15187.00 55.71 27.72 91.98 MIR30D-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 2765.00 14.05 5.05 91.28 MIR126-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 16184.00 82.25 29.54 100.0 MIR126-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 121.00 38.66 0.22 100.0 MIR374A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 951.00 76.02 1.74 100.0 MIR31-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 54.00 0.04 0.10 78.26 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 75.00 0.05 0.14 44.64 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 37.00 0.02 0.07 100.0 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 115.00 0.08 0.21 57.5 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 63.00 0.04 0.11 100.0 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 126.97 0.09 0.23 46.51 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 775.00 0.52 1.41 86.11 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 204.00 0.14 0.37 47.89 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 57.00 0.04 0.10 79.17 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 7.00 0.00 0.01 100.0 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 58.04 0.04 0.11 41.16 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 232.51 0.16 0.42 62.33 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 129.00 0.09 0.24 39.33 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 163.00 0.11 0.30 69.96 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 115.79 0.08 0.21 51.69 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 102.00 0.07 0.19 61.45 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 398.00 0.27 0.73 81.39 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 109166.00 73.23 199.27 99.89 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 947.00 0.64 1.73 82.64 RNA5S12-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 193.00 15.07 0.35 100.0 Y_RNA.14-201 misc RNA esophagus squamous epithelium (Tissue)