ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 213.00 1.91 0.39 100.0 B4GALNT2-202 protein coding esophagus squamous epithelium (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 571.00 88.80 1.04 100.0 NDE1-202 protein coding esophagus squamous epithelium (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 2.00 66.67 0.00 100.0 MIR450B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 55.00 39.29 0.10 100.0 MIR887-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 58.00 84.06 0.11 100.0 MIR889-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 7709.00 74.03 14.07 100.0 SNORD111-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 3013.00 67.44 5.50 85.48 SNORD88A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 26.00 86.67 0.05 100.0 MIR548K-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 254.00 62.25 0.46 100.0 MIR320B2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 101.00 91.82 0.18 100.0 MIR1271-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 594.00 0.38 1.08 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 2622.00 1.69 4.79 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 145246.00 93.50 265.13 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2763.00 1.78 5.04 100.0 SNORD100-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1828.00 54.62 3.34 100.0 SNORD111B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 44.00 3.78 0.08 100.0 RNU2-36P-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 143.00 12.29 0.26 100.0 RNU2-36P-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 865.00 0.70 1.58 100.0 SNORD19C-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 120222.00 97.69 219.45 99.29 SNORD19C-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 5048.00 5.04 9.21 100.0 SNORD12B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 397.00 0.40 0.72 100.0 SNORD12B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 89118.00 88.92 162.67 96.74 SNORD12B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 8.00 2.29 0.01 100.0 Y_RNA.609-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 68.00 35.60 0.12 100.0 Y_RNA.612-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 307162.00 98.25 560.68 99.72 SNORD71-201 snoRNA esophagus squamous epithelium (Tissue)