ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 433.00 72.05 1.91 87.3 ENST00000827714 lncRNA ovary (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 63.00 10.48 0.28 12.7 ENST00000827714 lncRNA ovary (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 2584.00 12.64 11.38 100.0 GAS5-377 lncRNA ovary (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 15939.00 77.99 70.17 100.0 GAS5-377 lncRNA ovary (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 1034.00 5.06 4.55 100.0 GAS5-377 lncRNA ovary (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 11.00 0.05 0.05 100.0 GAS5-377 lncRNA ovary (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 1.00 100.00 0.00 100.0 MIR205HG-245 lncRNA ovary (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 2.00 0.66 0.01 100.0 TAF12-DT-204 lncRNA ovary (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 64409.00 93.11 283.57 99.35 ZFAS1-238 lncRNA ovary (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 74.00 0.11 0.33 100.0 ZFAS1-238 lncRNA ovary (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 23.00 0.03 0.10 100.0 ZFAS1-238 lncRNA ovary (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1076.00 1.56 4.74 100.0 ZFAS1-238 lncRNA ovary (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 14780.00 65.92 65.07 100.0 ZFAS1-242 lncRNA ovary (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 6852.00 30.56 30.17 100.0 ZFAS1-242 lncRNA ovary (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1434.00 59.80 6.31 100.0 ENST00000837997 lncRNA ovary (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 275.00 11.47 1.21 100.0 ENST00000837997 lncRNA ovary (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 5086.00 64.28 22.39 73.44 ENST00000839036 lncRNA ovary (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 12.00 6.35 0.05 100.0 ENST00000849527 lncRNA ovary (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 26834.00 93.65 118.14 98.66 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA ovary (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 6.00 0.01 0.03 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA ovary (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 382.00 51.90 1.68 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA ovary (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 240.00 32.61 1.06 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA ovary (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 9.00 5.11 0.04 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA ovary (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 45.00 3.87 0.20 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA ovary (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 518.00 54.47 2.28 83.01 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA ovary (Tissue)