ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 42.00 0.02 0.18 100.0 MIR17HG-214 lncRNA ovary (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 29.00 0.02 0.13 100.0 MIR17HG-214 lncRNA ovary (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 7966.00 8.31 35.07 100.0 SNHG32-223 lncRNA ovary (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 269.00 0.28 1.18 100.0 SNHG32-223 lncRNA ovary (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 28.00 0.03 0.12 100.0 SNHG32-223 lncRNA ovary (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 1296.00 1.35 5.71 77.93 SNHG32-223 lncRNA ovary (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 84873.00 88.54 373.67 100.0 SNHG32-223 lncRNA ovary (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 12388.00 83.75 54.54 99.36 SNHG32-227 lncRNA ovary (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1387.00 9.38 6.11 100.0 SNHG32-227 lncRNA ovary (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 33.00 0.22 0.15 100.0 SNHG32-227 lncRNA ovary (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 2.00 0.01 0.01 100.0 SNHG32-227 lncRNA ovary (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 407.00 78.72 1.79 100.0 B4GALT1-203 nonsense mediated decay ovary (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 694.00 14.43 3.06 100.0 ENST00000722183 lncRNA ovary (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 705.00 14.66 3.10 92.64 ENST00000722183 lncRNA ovary (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 78.00 1.62 0.34 100.0 ENST00000722183 lncRNA ovary (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 52.00 26.13 0.23 100.0 MIR34BHG-202 lncRNA ovary (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 7504.00 77.77 33.04 82.69 THBS3-AS1-228 lncRNA ovary (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 187.00 54.84 0.82 100.0 MIR200CHG-202 lncRNA ovary (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 43.00 12.61 0.19 100.0 MIR200CHG-202 lncRNA ovary (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 1877.00 13.27 8.26 100.0 SNHG16-266 lncRNA ovary (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 4046.00 28.61 17.81 100.0 SNHG16-266 lncRNA ovary (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 269.00 1.90 1.18 100.0 SNHG16-266 lncRNA ovary (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 1491.00 10.54 6.56 100.0 SNHG16-266 lncRNA ovary (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 7.00 6.80 0.03 100.0 MEG8-261 lncRNA ovary (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 61.00 26.64 0.27 100.0 NR2F2-AS1-327 lncRNA ovary (Tissue)