ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 17881.00 26.91 78.72 93.73 SNHG14-224 lncRNA ovary (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 9839.00 14.81 43.32 100.0 SNHG14-224 lncRNA ovary (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 5445.00 8.19 23.97 90.54 SNHG14-224 lncRNA ovary (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 419.00 0.63 1.84 100.0 SNHG14-224 lncRNA ovary (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 1032.00 1.55 4.54 43.32 SNHG14-224 lncRNA ovary (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 1419.00 2.14 6.25 82.55 SNHG14-224 lncRNA ovary (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 956.00 1.44 4.21 69.63 SNHG14-224 lncRNA ovary (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 3100.50 7.21 13.65 44.3 5S_rRNA.20-201 rRNA pseudogene ovary (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 161.00 4.01 0.71 100.0 HSPA9-211 retained intron ovary (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1522.00 37.93 6.70 62.22 HSPA9-211 retained intron ovary (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 9333.00 67.37 41.09 100.0 DNM3OS-205 lncRNA ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1012.00 0.11 4.46 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 3903.00 0.44 17.18 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 434.00 0.05 1.91 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 182.00 0.02 0.80 84.26 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 2466.00 0.28 10.86 90.2 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 53.00 0.01 0.23 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 175.00 0.02 0.77 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 498.00 0.06 2.19 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 604255.00 68.58 2660.35 99.87 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 7250.00 0.82 31.92 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1531.00 0.17 6.74 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 661.00 0.08 2.91 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 5373.00 0.61 23.66 100.0 GAS5-230 retained intron ovary (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 2.00 0.00 0.01 100.0 GAS5-230 retained intron ovary (Tissue)