ENCFF073SVL

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR316SXP
Description: Part of ENCODE experiment ENCSR316SXP. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 269.00 3.46 1.29 100.0 SNHG16-266 lncRNA transverse colon (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 301.00 3.87 1.44 100.0 SNHG16-266 lncRNA transverse colon (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 5.00 83.33 0.02 100.0 MEG8-261 lncRNA transverse colon (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 121.00 24.69 0.58 100.0 NR2F2-AS1-327 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 8298.00 60.59 39.78 100.0 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 233.00 1.70 1.12 35.2 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 298.00 2.18 1.43 56.12 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 131.00 0.96 0.63 35.99 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 1412.00 10.31 6.77 100.0 ENST00000747675 lncRNA transverse colon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 14215.00 44.90 68.15 92.76 SNHG26-250 lncRNA transverse colon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 10349.00 32.69 49.62 91.29 SNHG26-250 lncRNA transverse colon (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 116.00 12.61 0.56 100.0 LINC02422-207 lncRNA transverse colon (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 543.00 7.24 2.60 100.0 ENST00000753088 lncRNA transverse colon (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 656.00 8.75 3.15 100.0 ENST00000753088 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 1557.18 2.66 7.47 42.74 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 1405.00 2.40 6.74 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 1120.00 1.91 5.37 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 370.00 0.63 1.77 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 12237.48 20.92 58.67 33.57 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 24212.73 41.39 116.08 66.56 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 1275.37 2.18 6.11 29.85 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1180.07 2.02 5.66 49.67 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 564.00 0.96 2.70 100.0 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 3805.22 6.50 18.24 71.41 ENST00000756336 lncRNA transverse colon (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 7.00 5.93 0.03 100.0 ENST00000756452 lncRNA transverse colon (Tissue)