ENCFF073SVL

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR316SXP
Description: Part of ENCODE experiment ENCSR316SXP. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 2960.00 85.06 14.19 94.72 MIR103A2-201 miRNA transverse colon (Tissue)
ENST00000362155.4 ENST00000362155.4_9_29_+ 9–29 4.00 80.00 0.02 100.0 MIR369-201 miRNA transverse colon (Tissue)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 221.00 51.40 1.06 100.0 MIR425-201 miRNA transverse colon (Tissue)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 71.00 16.51 0.34 100.0 MIR425-201 miRNA transverse colon (Tissue)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 49.00 50.00 0.23 100.0 MIR210-201 miRNA transverse colon (Tissue)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 45632.00 96.14 218.77 97.05 MIR378A-201 miRNA transverse colon (Tissue)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 289.00 50.97 1.39 100.0 MIR361-201 miRNA transverse colon (Tissue)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 766.00 89.49 3.67 96.84 MIR101-2-201 miRNA transverse colon (Tissue)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 31.00 3.62 0.15 55.36 MIR101-2-201 miRNA transverse colon (Tissue)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 2.00 66.67 0.01 100.0 MIR323A-201 miRNA transverse colon (Tissue)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 107592.00 98.73 515.83 99.2 MIR26A1-201 miRNA transverse colon (Tissue)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 4.00 66.67 0.02 100.0 MIR129-2-201 miRNA transverse colon (Tissue)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 414.00 57.02 1.98 100.0 MIR342-201 miRNA transverse colon (Tissue)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 31144.00 91.72 149.31 93.66 MIR148A-201 miRNA transverse colon (Tissue)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 177.00 0.52 0.85 100.0 MIR148A-201 miRNA transverse colon (Tissue)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 37.00 100.00 0.18 100.0 MIR410-201 miRNA transverse colon (Tissue)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 424.00 89.26 2.03 100.0 MIR409-201 miRNA transverse colon (Tissue)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 1.00 0.21 0.00 100.0 MIR409-201 miRNA transverse colon (Tissue)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 297.00 99.66 1.42 100.0 MIR411-201 miRNA transverse colon (Tissue)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 3178.00 93.44 15.24 95.98 MIR26B-201 miRNA transverse colon (Tissue)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 236.00 76.38 1.13 83.1 MIR148B-201 miRNA transverse colon (Tissue)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 6580.00 96.54 31.55 98.62 MIRLET7G-201 miRNA transverse colon (Tissue)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 204.00 1.49 0.98 100.0 MIR30D-201 miRNA transverse colon (Tissue)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 10143.00 74.19 48.63 94.34 MIR30D-201 miRNA transverse colon (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 2599.00 19.01 12.46 81.04 MIR30D-201 miRNA transverse colon (Tissue)