ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 7572.00 91.87 324.18 99.14 ZFAS1-238 lncRNA GM23248 (Cell line)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 25.00 0.30 1.07 100.0 ZFAS1-238 lncRNA GM23248 (Cell line)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 159.00 1.93 6.81 100.0 ZFAS1-238 lncRNA GM23248 (Cell line)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 453.00 43.94 19.39 100.0 ZFAS1-242 lncRNA GM23248 (Cell line)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 456.00 44.23 19.52 100.0 ZFAS1-242 lncRNA GM23248 (Cell line)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 62.00 21.53 2.65 100.0 ENST00000837997 lncRNA GM23248 (Cell line)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 170.00 59.03 7.28 100.0 ENST00000837997 lncRNA GM23248 (Cell line)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 183.00 69.85 7.83 80.97 ENST00000839036 lncRNA GM23248 (Cell line)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 428.00 71.21 18.32 100.0 ENST00000849527 lncRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 19.00 4.07 0.81 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 201.00 43.04 8.61 93.93 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 28.00 0.32 1.20 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 200.00 74.91 8.56 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 10.00 3.75 0.43 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 12.00 15.79 0.51 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 93.00 13.58 3.98 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 99.00 49.75 4.24 87.61 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 110.00 1.25 4.71 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 4.00 13.79 0.17 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 41.00 12.54 1.76 97.62 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 10.00 3.06 0.43 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 50.00 15.29 2.14 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 213.00 65.74 9.12 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 42.00 1.16 1.80 77.78 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 127.00 3.52 5.44 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)