ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 335003.00 41.89 1251.10 99.75 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1671.00 0.21 6.24 81.12 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 126629.00 15.84 472.91 99.37 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 7901.00 0.99 29.51 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 52725.00 6.59 196.91 99.9 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 233.00 0.03 0.87 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 241.00 0.03 0.90 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1098.00 0.14 4.10 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 103.00 0.01 0.38 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 379.00 0.05 1.42 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 271.00 0.03 1.01 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 8553.00 1.07 31.94 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 42.00 0.01 0.16 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1176.00 0.15 4.39 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 23622.00 2.95 88.22 81.4 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 6.00 0.00 0.02 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 167723.00 20.98 626.38 98.89 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 25.00 0.00 0.09 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 26.00 0.00 0.10 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 9516.00 1.19 35.54 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 2878.00 0.36 10.75 90.53 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 634.13 0.08 2.37 39.12 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 781.00 0.10 2.92 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 2111.00 0.26 7.88 69.35 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1748.00 0.22 6.53 100.0 SNHG1-248 lncRNA prostate gland (Tissue)