ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 87.00 1.09 0.32 100.0 RPL7A-207 protein coding CDS not defined prostate gland (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 2949.00 37.10 11.01 100.0 RPL7A-207 protein coding CDS not defined prostate gland (Tissue)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 1479.00 18.61 5.52 70.26 RPL7A-207 protein coding CDS not defined prostate gland (Tissue)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 1374.00 7.97 5.13 19.94 RN7SL2-201 misc RNA prostate gland (Tissue)
ENST00000490232.3 ENST00000490232.3_219_300_+ 219–300 53.00 0.31 0.20 100.0 RN7SL2-201 misc RNA prostate gland (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 550.00 85.27 2.05 100.0 RGS11-208 retained intron prostate gland (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 255.00 1.57 0.95 55.8 NOP56-217 protein coding CDS not defined prostate gland (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 11826.00 72.98 44.17 77.1 NOP56-217 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 119388.00 86.99 445.87 95.37 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 1920.00 1.40 7.17 86.53 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 381.00 0.28 1.42 47.8 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 92.00 0.07 0.34 100.0 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 416.00 0.30 1.55 52.2 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 1314.00 0.96 4.91 100.0 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 2619.00 1.91 9.78 100.0 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 2589.00 78.91 9.67 100.0 GNL3-211 retained intron prostate gland (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 332.00 10.12 1.24 100.0 GNL3-211 retained intron prostate gland (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 103.00 2.51 0.38 100.0 RPL5-205 retained intron prostate gland (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 3548.00 86.60 13.25 100.0 RPL5-205 retained intron prostate gland (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 80.00 3.09 0.30 100.0 ZBED9-AS1-201 lncRNA prostate gland (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 2967.00 92.69 11.08 100.0 RPS3A-206 retained intron prostate gland (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 7239.00 97.13 27.03 100.0 COX7C-203 protein coding prostate gland (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 10701.45 47.33 39.97 86.64 RACK1-229 protein coding prostate gland (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 5712.00 25.27 21.33 99.7 RACK1-229 protein coding prostate gland (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1955.00 8.65 7.30 100.0 RACK1-229 protein coding prostate gland (Tissue)