ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 215.00 28.14 1.21 100.0 MEG8-222 lncRNA spleen (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 180.00 23.56 1.01 100.0 MEG8-222 lncRNA spleen (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 120.00 4.38 0.68 100.0 SNHG14-224 lncRNA spleen (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 231.00 8.43 1.30 66.76 SNHG14-224 lncRNA spleen (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 241.00 8.80 1.36 86.38 SNHG14-224 lncRNA spleen (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 8164.91 6.32 46.01 49.97 5S_rRNA.20-201 rRNA pseudogene spleen (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 708.00 7.06 3.99 100.0 HSPA9-211 retained intron spleen (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 4696.00 46.84 26.47 68.37 HSPA9-211 retained intron spleen (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 7869.00 82.83 44.35 100.0 DNM3OS-205 lncRNA spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 2510.00 0.47 14.15 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 2037.00 0.38 11.48 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 11839.00 2.20 66.72 96.49 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 81.00 0.02 0.46 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 101.00 0.02 0.57 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 233.00 0.04 1.31 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 302489.00 56.15 1704.73 99.87 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1678.00 0.31 9.46 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 23170.00 4.30 130.58 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1591.00 0.30 8.97 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 2003.00 0.37 11.29 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 6591.00 1.22 37.14 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 42.00 0.01 0.24 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 905.00 0.17 5.10 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 2088.00 0.39 11.77 100.0 GAS5-230 retained intron spleen (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 44123.00 8.19 248.66 88.03 GAS5-230 retained intron spleen (Tissue)