ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 50562.00 95.38 284.95 100.0 SNHG14-220 retained intron spleen (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 3163.00 99.75 17.83 100.0 TEKT4P2-201 transcribed unprocessed pseudogene spleen (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 23044.00 76.57 129.87 90.95 RPL4-202 retained intron spleen (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 792.00 2.63 4.46 100.0 RPL4-202 retained intron spleen (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 3.00 0.01 0.02 100.0 RPL4-202 retained intron spleen (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 1013.00 3.37 5.71 100.0 RPL4-202 retained intron spleen (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 658.00 2.19 3.71 100.0 RPL4-202 retained intron spleen (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 91.00 0.28 0.51 100.0 ENST00000563103 lncRNA spleen (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 13570.00 62.30 76.48 100.0 RPL4-207 retained intron spleen (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 1810.00 8.31 10.20 100.0 RPL4-207 retained intron spleen (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 24440.00 74.85 137.74 92.76 ENST00000565336 lncRNA spleen (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 2900.00 8.88 16.34 61.28 ENST00000565336 lncRNA spleen (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 10843.00 35.53 61.11 100.0 RBMX-210 retained intron spleen (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 9644.00 31.60 54.35 100.0 RBMX-210 retained intron spleen (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 56.00 0.18 0.32 7.76 RBMX-210 retained intron spleen (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1438.00 58.46 8.10 100.0 RPL4-214 retained intron spleen (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 4824.00 26.38 27.19 43.91 POLG-DT-202 lncRNA spleen (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 7016.62 38.37 39.54 74.64 POLG-DT-202 lncRNA spleen (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 439.00 2.40 2.47 100.0 POLG-DT-202 lncRNA spleen (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 84.00 2.71 0.47 100.0 ENST00000570843 lncRNA spleen (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 1442.00 82.35 8.13 100.0 MIR497HG-207 lncRNA spleen (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 41664.00 91.62 234.81 92.2 MIR22HG-212 lncRNA spleen (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 758.00 25.87 4.27 28.78 SNORD53B-201 snoRNA spleen (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 1876.00 64.03 10.57 71.22 SNORD53B-201 snoRNA spleen (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 33.00 38.82 0.19 100.0 ENST00000578036 lncRNA spleen (Tissue)