ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 1254.00 0.15 7.07 100.0 EIF4A2-219 retained intron spleen (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 3462.00 0.42 19.51 44.83 EIF4A2-219 retained intron spleen (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 440.00 0.05 2.48 100.0 EIF4A2-219 retained intron spleen (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 5473.00 0.67 30.84 74.52 EIF4A2-219 retained intron spleen (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 706.00 0.09 3.98 34.34 EIF4A2-219 retained intron spleen (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 16561.00 2.03 93.33 86.54 EIF4A2-219 retained intron spleen (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 127680.00 15.64 719.56 83.9 EIF4A2-219 retained intron spleen (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 1.00 0.00 0.01 100.0 EIF4A2-219 retained intron spleen (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 599956.00 73.47 3381.16 98.94 EIF4A2-219 retained intron spleen (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 14810.00 1.81 83.46 48.77 EIF4A2-219 retained intron spleen (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 141.00 14.63 0.79 100.0 RPL7A-206 protein coding CDS not defined spleen (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 410.00 42.53 2.31 100.0 RPL7A-206 protein coding CDS not defined spleen (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 83.00 8.61 0.47 100.0 RPL7A-206 protein coding CDS not defined spleen (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 49265.00 4.31 277.64 94.77 RPL21-209 retained intron spleen (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 18239.00 1.59 102.79 100.0 RPL21-209 retained intron spleen (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 1728.00 0.15 9.74 100.0 RPL21-209 retained intron spleen (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 1065028.00 93.09 6002.16 97.93 RPL21-209 retained intron spleen (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 23.00 0.00 0.13 100.0 RPL21-209 retained intron spleen (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 31.00 41.33 0.17 100.0 GABRE-209 retained intron spleen (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 3192.00 29.13 17.99 100.0 RPL13A-212 retained intron spleen (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 47.00 0.43 0.26 100.0 RPL13A-212 retained intron spleen (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 70.00 0.64 0.39 100.0 RPL13A-212 retained intron spleen (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 492.00 10.78 2.77 100.0 RPL7A-207 protein coding CDS not defined spleen (Tissue)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 1029.00 22.55 5.80 100.0 RPL7A-207 protein coding CDS not defined spleen (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 13.00 68.42 0.07 100.0 RGS11-208 retained intron spleen (Tissue)