ENCFF015UJX

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR917CQJ
Description: Part of ENCODE experiment ENCSR917CQJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 2924.00 67.13 16.48 100.0 MT-RNR1-201 Mt rRNA spleen (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 199.00 73.43 1.12 100.0 MIR454-201 miRNA spleen (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 64.00 41.03 0.36 100.0 MIR501-201 miRNA spleen (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 769.00 91.01 4.33 100.0 MIR769-201 miRNA spleen (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 302.00 79.89 1.70 100.0 KRTAP19-1-201 protein coding spleen (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 3.00 13.04 0.02 100.0 MIR708-201 miRNA spleen (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 5.00 71.43 0.03 100.0 MIR509-3-201 miRNA spleen (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 11.00 45.83 0.06 100.0 MIR543-201 miRNA spleen (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 15.00 100.00 0.08 100.0 MIR301B-201 miRNA spleen (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 1116.00 55.38 6.29 81.16 RNU1-82P-201 snRNA spleen (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4728.00 23.34 26.65 63.79 SNORD66-201 snoRNA spleen (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 220.00 1.09 1.24 100.0 SNORD66-201 snoRNA spleen (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 4532.00 22.37 25.54 100.0 SNORD66-201 snoRNA spleen (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 126.00 57.01 0.71 100.0 U3.17-201 snoRNA spleen (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 10931.00 93.14 61.60 100.0 SNORD17-201 snoRNA spleen (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 917.00 66.40 5.17 100.0 SNORD72-201 snoRNA spleen (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 312.00 69.49 1.76 100.0 SNORD70B-201 snoRNA spleen (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 2635.00 61.84 14.85 92.49 RNY4P18-201 misc RNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 19610.00 53.08 110.52 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 3998.00 10.82 22.53 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 7450.00 20.16 41.99 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 2023.00 5.48 11.40 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 184.00 0.29 1.04 100.0 B4GALNT2-202 protein coding spleen (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 57477.00 89.80 323.92 93.13 B4GALNT2-202 protein coding spleen (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 496.00 81.85 2.80 100.0 NDE1-202 protein coding spleen (Tissue)