ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 34.00 10.97 0.04 100.0 SNORA7B-201 snoRNA GM23338 (Cell line)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 10.00 41.67 0.01 100.0 SNORD14D-201 snoRNA GM23338 (Cell line)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 89.00 10.48 0.11 100.0 Y_RNA.555-201 misc RNA GM23338 (Cell line)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 15012.00 93.87 18.02 96.43 MIR25-201 miRNA GM23338 (Cell line)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 3133.00 93.13 3.76 99.46 MIR99B-201 miRNA GM23338 (Cell line)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 55.00 74.32 0.07 90.16 MIR23B-201 miRNA GM23338 (Cell line)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 15.00 20.27 0.02 44.12 MIR23B-201 miRNA GM23338 (Cell line)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 19.00 46.34 0.02 100.0 MIR203A-201 miRNA GM23338 (Cell line)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 13.00 16.67 0.02 100.0 MIR199B-201 miRNA GM23338 (Cell line)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 55.00 70.51 0.07 91.67 MIR199B-201 miRNA GM23338 (Cell line)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 142.00 95.30 0.17 100.0 MIR30B-201 miRNA GM23338 (Cell line)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 84.00 92.31 0.10 100.0 MIR181D-201 miRNA GM23338 (Cell line)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 2.00 100.00 0.00 100.0 MIR508-201 miRNA GM23338 (Cell line)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 7.00 100.00 0.01 100.0 MIR215-201 miRNA GM23338 (Cell line)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 21.00 1.83 0.03 100.0 MIR181A2-201 miRNA GM23338 (Cell line)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 69001.00 99.40 82.81 99.82 MIR191-201 miRNA GM23338 (Cell line)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 68.00 80.95 0.08 81.93 MIR149-201 miRNA GM23338 (Cell line)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 58.00 45.67 0.07 65.17 MIR181C-201 miRNA GM23338 (Cell line)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 28.00 22.05 0.03 100.0 MIR181C-201 miRNA GM23338 (Cell line)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 17.00 77.27 0.02 100.0 MIR194-1-201 miRNA GM23338 (Cell line)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 418.00 90.28 0.50 92.27 MIR128-2-201 miRNA GM23338 (Cell line)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1.00 100.00 0.00 100.0 MIR99A-201 miRNA GM23338 (Cell line)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 54.00 0.65 0.06 100.0 MIR28-201 miRNA GM23338 (Cell line)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 7540.00 91.07 9.05 94.38 MIR28-201 miRNA GM23338 (Cell line)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 127.00 1.53 0.15 90.07 MIR28-201 miRNA GM23338 (Cell line)