ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 648.46 0.82 1.75 31.6 ENST00000756336 lncRNA urinary bladder (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 146.00 0.19 0.39 100.0 ENST00000756336 lncRNA urinary bladder (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 372.54 0.47 1.00 86.04 ENST00000756336 lncRNA urinary bladder (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 625.00 86.33 1.68 100.0 ENST00000756452 lncRNA urinary bladder (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 4124.00 45.51 11.11 100.0 ENST00000760093 lncRNA urinary bladder (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 642.00 7.09 1.73 100.0 ENST00000760093 lncRNA urinary bladder (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 59658.00 82.37 160.78 90.12 SNHG14-356 lncRNA urinary bladder (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 4256.00 15.53 11.47 57.36 LINC02806-241 lncRNA urinary bladder (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 60.00 0.22 0.16 100.0 LINC02806-241 lncRNA urinary bladder (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 12808.00 46.73 34.52 71.15 LINC02806-241 lncRNA urinary bladder (Tissue)
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 9.00 0.03 0.02 100.0 LINC02806-241 lncRNA urinary bladder (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 763.00 87.30 2.06 100.0 EHBP1-AS1-210 lncRNA urinary bladder (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 185.00 19.21 0.50 100.0 ENST00000770398 lncRNA urinary bladder (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 149.00 15.47 0.40 100.0 ENST00000770398 lncRNA urinary bladder (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 423.00 43.93 1.14 100.0 ENST00000770398 lncRNA urinary bladder (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 91.00 0.04 0.25 100.0 ENST00000771298 lncRNA urinary bladder (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 133.00 0.07 0.36 100.0 ENST00000771298 lncRNA urinary bladder (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 191844.00 93.86 517.01 96.88 ENST00000771298 lncRNA urinary bladder (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 194.00 0.09 0.52 100.0 ENST00000771298 lncRNA urinary bladder (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 4504.00 61.86 12.14 100.0 ENST00000772672 lncRNA urinary bladder (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 8.00 0.11 0.02 100.0 ENST00000772672 lncRNA urinary bladder (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 124.00 1.70 0.33 100.0 ENST00000772672 lncRNA urinary bladder (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 3285.00 61.14 8.85 100.0 ENST00000773843 lncRNA urinary bladder (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 53.00 0.03 0.14 100.0 SNHG12-223 lncRNA urinary bladder (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 106923.00 50.84 288.15 95.25 SNHG12-223 lncRNA urinary bladder (Tissue)