ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 6630.00 73.15 17.87 100.0 MEG8-240 lncRNA urinary bladder (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 3750.00 31.59 10.11 100.0 SNHG14-303 lncRNA urinary bladder (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 21.00 0.91 0.06 100.0 SNHG14-306 lncRNA urinary bladder (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 83.00 3.61 0.22 100.0 SNHG14-306 lncRNA urinary bladder (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 1677.00 73.01 4.52 98.94 SNHG14-306 lncRNA urinary bladder (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 85.00 3.70 0.23 100.0 SNHG14-306 lncRNA urinary bladder (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 58.00 0.56 0.16 100.0 ENST00000666735 lncRNA urinary bladder (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 3903.00 37.40 10.52 100.0 ENST00000666735 lncRNA urinary bladder (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 30828.00 87.23 83.08 100.0 MEG8-242 lncRNA urinary bladder (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 6772.68 26.99 18.25 33.87 SNHG14-312 lncRNA urinary bladder (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 13215.47 52.66 35.62 66.08 SNHG14-312 lncRNA urinary bladder (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 853.00 3.40 2.30 100.0 SNHG14-312 lncRNA urinary bladder (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 1327.00 0.74 3.58 100.0 MEG8-244 lncRNA urinary bladder (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 2296.00 1.28 6.19 100.0 MEG8-244 lncRNA urinary bladder (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 170240.00 94.98 458.79 99.95 MEG8-244 lncRNA urinary bladder (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 859.00 0.06 2.31 100.0 SNHG1-248 lncRNA urinary bladder (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 4.00 0.00 0.01 100.0 SNHG1-248 lncRNA urinary bladder (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 5144.00 0.33 13.86 99.32 SNHG1-248 lncRNA urinary bladder (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 561.27 0.04 1.51 39.0 SNHG1-248 lncRNA urinary bladder (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2769.00 0.18 7.46 90.82 SNHG1-248 lncRNA urinary bladder (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 761094.00 49.14 2051.12 98.81 SNHG1-248 lncRNA urinary bladder (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 862.00 0.06 2.32 74.57 SNHG1-248 lncRNA urinary bladder (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 99522.00 6.43 268.21 99.59 SNHG1-248 lncRNA urinary bladder (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 6285.00 0.41 16.94 100.0 SNHG1-248 lncRNA urinary bladder (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 119716.00 7.73 322.63 99.65 SNHG1-248 lncRNA urinary bladder (Tissue)