ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 121.00 1.00 0.33 100.0 MIR30D-201 miRNA urinary bladder (Tissue)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 9590.00 78.94 25.84 95.21 MIR30D-201 miRNA urinary bladder (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 1481.00 12.19 3.99 75.41 MIR30D-201 miRNA urinary bladder (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 98048.00 70.97 264.24 100.0 MIR126-201 miRNA urinary bladder (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 34954.00 25.30 94.20 94.59 MIR126-201 miRNA urinary bladder (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 850.00 35.20 2.29 100.0 MIR374A-201 miRNA urinary bladder (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 2956.00 73.44 7.97 100.0 MIR31-201 miRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 29.00 0.11 0.08 100.0 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 17.00 0.06 0.05 36.17 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 15.00 0.06 0.04 100.0 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 149.28 0.55 0.40 63.26 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 96.00 0.35 0.26 93.2 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 29.00 0.11 0.08 65.91 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 111.17 0.41 0.30 50.76 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 166.20 0.61 0.45 64.42 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 29.00 0.11 0.08 38.67 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 75.00 0.28 0.20 71.43 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 190.66 0.70 0.51 48.39 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 58.00 0.21 0.16 82.86 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 26.00 0.10 0.07 100.0 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 91.00 0.34 0.25 79.13 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 797.00 2.94 2.15 99.13 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 12.00 0.04 0.03 92.31 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 57.00 0.21 0.15 59.38 RNA5S12-201 rRNA urinary bladder (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 9643.00 35.58 25.99 99.93 RNA5S12-201 rRNA urinary bladder (Tissue)