ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 2516.93 30.59 6.78 35.2 MIR182-201 miRNA urinary bladder (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 5272.59 64.07 14.21 71.0 MIR182-201 miRNA urinary bladder (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 412302.00 95.95 1111.14 97.05 MIR100-201 miRNA urinary bladder (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 665.00 87.85 1.79 100.0 MIR301A-201 miRNA urinary bladder (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 23822.00 80.35 64.20 91.29 MIR130A-201 miRNA urinary bladder (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 5508.00 18.58 14.84 32.32 MIR130A-201 miRNA urinary bladder (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 423171.00 98.28 1140.43 99.24 MIRLET7F2-201 miRNA urinary bladder (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 579.00 70.52 1.56 100.0 MIR652-201 miRNA urinary bladder (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 62.00 72.09 0.17 100.0 MIR653-201 miRNA urinary bladder (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 3303.00 69.11 8.90 100.0 MIR140-201 miRNA urinary bladder (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1307.00 32.91 3.52 73.34 MIR106B-201 miRNA urinary bladder (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 376.00 9.47 1.01 100.0 MIR106B-201 miRNA urinary bladder (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 89434.00 69.27 241.02 98.34 SNORD83A-201 snoRNA urinary bladder (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 36445.00 28.23 98.22 94.96 SNORD83A-201 snoRNA urinary bladder (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 3312.00 79.41 8.93 100.0 SNORD41-201 snoRNA urinary bladder (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 43.00 1.11 0.12 100.0 MT-TF-201 Mt tRNA urinary bladder (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 55.00 1.42 0.15 53.4 MT-TF-201 Mt tRNA urinary bladder (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 1097.00 28.24 2.96 73.18 MT-TF-201 Mt tRNA urinary bladder (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1662.00 35.36 4.48 100.0 MT-TV-201 Mt tRNA urinary bladder (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 2588.00 7.54 6.97 100.0 MT-RNR2-201 Mt rRNA urinary bladder (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 278.00 0.81 0.75 100.0 MT-RNR2-201 Mt rRNA urinary bladder (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 316.00 0.92 0.85 100.0 MT-RNR2-201 Mt rRNA urinary bladder (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 5968.00 17.39 16.08 85.55 MT-RNR2-201 Mt rRNA urinary bladder (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 452.00 1.32 1.22 100.0 MT-RNR2-201 Mt rRNA urinary bladder (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 4.00 0.01 0.01 100.0 MT-RNR2-201 Mt rRNA urinary bladder (Tissue)