ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 129.00 3.54 0.25 100.0 7SK.1-201 misc RNA tongue (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 122.00 3.35 0.24 100.0 7SK.1-201 misc RNA tongue (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 731.00 28.04 1.42 100.0 SNORD14C-201 snoRNA tongue (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 1145.00 39.04 2.23 100.0 SNORD115-44-201 snoRNA tongue (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 59.00 2.70 0.11 100.0 RNA5SP77-201 rRNA pseudogene tongue (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 323504.00 24.34 630.54 100.0 SNORD114-22-201 snoRNA tongue (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 938279.00 70.59 1828.78 98.73 SNORD114-22-201 snoRNA tongue (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 2126.00 10.55 4.14 100.0 SNORD6-201 snoRNA tongue (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 15699.00 77.88 30.60 100.0 SNORD6-201 snoRNA tongue (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 1602.00 10.23 3.12 100.0 RNY3-201 misc RNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 63143.00 57.67 123.07 99.3 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 679.00 0.62 1.32 100.0 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 10663.00 9.74 20.78 88.75 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 10202.29 9.32 19.89 47.0 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 11138.76 10.17 21.71 51.31 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1256.00 1.15 2.45 100.0 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 248.00 0.23 0.48 100.0 SNORD82-201 snoRNA tongue (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 41195.00 92.34 80.29 94.38 MIR146B-201 miRNA tongue (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 18.00 12.00 0.04 100.0 SNHG20-201 lncRNA tongue (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 1015.00 21.62 1.98 100.0 ATP5MK-205 protein coding tongue (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 1176.00 25.05 2.29 100.0 ATP5MK-205 protein coding tongue (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 45.00 22.39 0.09 100.0 LINC01556-201 lncRNA tongue (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 328.00 60.18 0.64 100.0 ATAD3A-202 protein coding tongue (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 26096.00 64.97 50.86 80.86 TMC5-202 protein coding tongue (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 86.00 76.79 0.17 100.0 ZMYM2-203 protein coding tongue (Tissue)