ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 36467.96 32.64 71.08 37.12 MIR182-201 miRNA tongue (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 69796.09 62.47 136.04 70.42 MIR182-201 miRNA tongue (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 30266.00 79.97 58.99 85.23 MIR100-201 miRNA tongue (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 881.00 76.21 1.72 100.0 MIR301A-201 miRNA tongue (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 33203.00 79.80 64.72 86.71 MIR130A-201 miRNA tongue (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 7840.00 18.84 15.28 36.47 MIR130A-201 miRNA tongue (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 1461730.00 98.01 2849.03 99.41 MIRLET7F2-201 miRNA tongue (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 849.00 68.08 1.65 100.0 MIR652-201 miRNA tongue (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 759.00 50.20 1.48 100.0 MIR653-201 miRNA tongue (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 7822.00 73.70 15.25 100.0 MIR140-201 miRNA tongue (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1740.00 33.47 3.39 76.65 MIR106B-201 miRNA tongue (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 553.00 10.64 1.08 100.0 MIR106B-201 miRNA tongue (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 155960.00 62.74 303.98 98.16 SNORD83A-201 snoRNA tongue (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 80864.00 32.53 157.61 96.49 SNORD83A-201 snoRNA tongue (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 1760.00 81.59 3.43 100.0 SNORD41-201 snoRNA tongue (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 16.00 0.71 0.03 100.0 MT-TF-201 Mt tRNA tongue (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 8.00 0.35 0.02 40.0 MT-TF-201 Mt tRNA tongue (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 144.00 6.35 0.28 52.36 MT-TF-201 Mt tRNA tongue (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1235.00 16.13 2.41 100.0 MT-TV-201 Mt tRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 10021.00 12.51 19.53 100.0 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 5129.00 6.40 10.00 100.0 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 10115.00 12.62 19.71 100.0 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 6139.00 7.66 11.97 86.08 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 155.00 0.19 0.30 100.0 MT-RNR2-201 Mt rRNA tongue (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 37.00 0.05 0.07 100.0 MT-RNR2-201 Mt rRNA tongue (Tissue)