ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 282.00 75.00 0.59 100.0 SNORD115-44-201 snoRNA metanephros (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 77.00 20.32 0.16 100.0 RNA5SP77-201 rRNA pseudogene metanephros (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 64856.00 37.46 136.02 100.0 SNORD114-22-201 snoRNA metanephros (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 101494.00 58.62 212.86 99.1 SNORD114-22-201 snoRNA metanephros (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1441.00 8.79 3.02 100.0 SNORD6-201 snoRNA metanephros (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 13532.00 82.58 28.38 100.0 SNORD6-201 snoRNA metanephros (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 390.00 4.92 0.82 100.0 RNY3-201 misc RNA metanephros (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 13945.51 14.12 29.25 47.35 SNORD82-201 snoRNA metanephros (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 666.00 0.67 1.40 100.0 SNORD82-201 snoRNA metanephros (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 15454.77 15.65 32.41 52.48 SNORD82-201 snoRNA metanephros (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 386.00 0.39 0.81 100.0 SNORD82-201 snoRNA metanephros (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 1980.00 2.00 4.15 100.0 SNORD82-201 snoRNA metanephros (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 46945.00 47.52 98.45 97.75 SNORD82-201 snoRNA metanephros (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 10383.00 10.51 21.78 89.19 SNORD82-201 snoRNA metanephros (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 58624.00 93.55 122.95 95.05 MIR146B-201 miRNA metanephros (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 1135.00 86.38 2.38 100.0 SNHG20-201 lncRNA metanephros (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 246.00 28.34 0.52 100.0 ATP5MK-205 protein coding metanephros (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 57.00 6.57 0.12 100.0 ATP5MK-205 protein coding metanephros (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 6.00 11.32 0.01 100.0 LINC01556-201 lncRNA metanephros (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 11.00 19.30 0.02 100.0 ATAD3A-202 protein coding metanephros (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 860.00 45.55 1.80 71.02 TMC5-202 protein coding metanephros (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 17.00 33.33 0.04 100.0 ZMYM2-203 protein coding metanephros (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 452.00 8.36 0.95 100.0 RNVU1-7-201 snRNA metanephros (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 1509.00 44.23 3.16 100.0 SNORD24-201 snoRNA metanephros (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 277.00 0.36 0.58 100.0 SNORD101-201 snoRNA metanephros (Tissue)