ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 14443.00 80.55 30.29 100.0 SNORD52-201 snoRNA metanephros (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 3526.00 32.39 7.39 61.94 SNORD117-201 snoRNA metanephros (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 3357.00 30.83 7.04 48.77 SNORD117-201 snoRNA metanephros (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 2034.00 3.54 4.27 100.0 SNORD114-3-201 snoRNA metanephros (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 2354.00 4.10 4.94 100.0 SNORD114-3-201 snoRNA metanephros (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 49208.00 85.69 103.20 96.59 SNORD114-3-201 snoRNA metanephros (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 27.00 3.47 0.06 100.0 RNA5SP298-201 rRNA pseudogene metanephros (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 194.00 62.38 0.41 100.0 SNORD115-38-201 snoRNA metanephros (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 229.00 57.39 0.48 100.0 SNORD115-10-201 snoRNA metanephros (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 30029.00 88.07 62.98 100.0 SNORD113-9-201 snoRNA metanephros (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 13.00 26.00 0.03 100.0 SNORD115-20-201 snoRNA metanephros (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 39435.00 94.13 82.70 100.0 SNORD38A-201 snoRNA metanephros (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 660.00 1.58 1.38 100.0 SNORD38A-201 snoRNA metanephros (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 331.00 0.79 0.69 100.0 SNORD38A-201 snoRNA metanephros (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 50069.00 87.82 105.01 96.7 SNORD114-20-201 snoRNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 1919.00 4.30 4.02 61.61 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 4035.00 9.03 8.46 100.0 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 4728.00 10.58 9.92 100.0 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 804.00 1.80 1.69 100.0 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 2139.00 4.79 4.49 100.0 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 1623.00 3.63 3.40 24.3 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 38.00 0.09 0.08 100.0 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 6024.00 13.48 12.63 83.43 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 2330.00 5.22 4.89 72.2 7SK.1-201 misc RNA metanephros (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 954.00 59.81 2.00 100.0 SNORD14C-201 snoRNA metanephros (Tissue)