ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 102.00 52.31 0.21 100.0 SNORD115-32-201 snoRNA metanephros (Tissue)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 86.00 62.32 0.18 100.0 SNORD115-30-201 snoRNA metanephros (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 274.00 2.83 0.57 100.0 RNY1-201 misc RNA metanephros (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 527.00 5.44 1.11 100.0 RNY1-201 misc RNA metanephros (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 1931.00 19.92 4.05 100.0 RNY1-201 misc RNA metanephros (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 2188.38 22.58 4.59 62.33 RNY1-201 misc RNA metanephros (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 857.60 8.85 1.80 34.21 RNY1-201 misc RNA metanephros (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 87.00 34.25 0.18 100.0 SNORD115-42-201 snoRNA metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 522.39 7.94 1.10 39.61 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 38.00 0.58 0.08 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 867.00 13.17 1.82 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 36.09 0.55 0.08 53.87 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 33.59 0.51 0.07 44.79 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 4.00 0.06 0.01 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 249.00 3.78 0.52 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 7.00 0.11 0.01 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 19207.00 52.94 40.28 100.0 SNORD114-9-201 snoRNA metanephros (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 13619.00 37.54 28.56 100.0 SNORD114-9-201 snoRNA metanephros (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 728.00 5.09 1.53 100.0 Y_RNA.234-201 misc RNA metanephros (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 51.00 60.00 0.11 100.0 SNORD115-23-201 snoRNA metanephros (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 22.00 1.30 0.05 100.0 RNA5SP141-201 rRNA pseudogene metanephros (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 1686.00 57.06 3.54 100.0 SNORD114-15-201 snoRNA metanephros (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1192.00 47.32 2.50 100.0 ENST00000364722 snoRNA metanephros (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 132.00 41.12 0.28 100.0 SNORD115-15-201 snoRNA metanephros (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 1482.00 39.68 3.11 100.0 SNORD113-3-201 snoRNA metanephros (Tissue)