ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 472.00 3.64 0.99 100.0 SNORD104-201 snoRNA metanephros (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1246.00 9.61 2.61 100.0 SNORD104-201 snoRNA metanephros (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 720.00 76.60 1.51 97.56 SNORD115-9-201 snoRNA metanephros (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 1853.00 37.65 3.89 82.28 RNA5SP358-201 rRNA pseudogene metanephros (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 79.00 3.03 0.17 74.53 RNA5SP145-201 rRNA pseudogene metanephros (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 50.00 19.69 0.10 100.0 Y_RNA.105-201 misc RNA metanephros (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 784.00 42.15 1.64 100.0 RNY4P9-201 misc RNA metanephros (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 457.00 4.24 0.96 100.0 RNU5B-1-201 snRNA metanephros (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 517.00 4.79 1.08 100.0 RNU5B-1-201 snRNA metanephros (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 149.00 1.38 0.31 100.0 RNU5B-1-201 snRNA metanephros (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 483.00 4.48 1.01 71.88 RNU5B-1-201 snRNA metanephros (Tissue)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 70.00 0.65 0.15 100.0 RNU5B-1-201 snRNA metanephros (Tissue)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 1183.00 10.96 2.48 100.0 RNU5B-1-201 snRNA metanephros (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 1480.00 91.75 3.10 98.47 SNORD115-18-201 snoRNA metanephros (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 5485.00 67.53 11.50 96.23 RNY4P27-201 misc RNA metanephros (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 410.00 5.05 0.86 65.6 RNY4P27-201 misc RNA metanephros (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 539.00 19.35 1.13 100.0 Y_RNA.136-201 misc RNA metanephros (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 293.00 64.97 0.61 100.0 SNORD115-41-201 snoRNA metanephros (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 70.00 29.66 0.15 100.0 SNORD115-5-201 snoRNA metanephros (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 75.00 44.38 0.16 100.0 SNORD115-33-201 snoRNA metanephros (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 24893.00 91.76 52.21 99.29 SNORD114-25-201 snoRNA metanephros (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 64357.00 94.80 134.97 100.0 SNORD113-7-201 snoRNA metanephros (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 37.00 29.60 0.08 100.0 SNORD115-8-201 snoRNA metanephros (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 234.00 31.45 0.49 100.0 Y_RNA.181-201 misc RNA metanephros (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 180.00 53.57 0.38 100.0 SNORD115-16-201 snoRNA metanephros (Tissue)